PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT03756
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family WRKY
Protein Properties Length: 229aa    MW: 24721.5 Da    PI: 11.0051
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT03756genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY68.11.3e-21127167241
               --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE- CS
      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkvers 41 
                D+++WrKYGqK++kgs++pr+YY+C+s  gCp++k+ve  
  EMT03756 127 ADEFSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVESV 167
               69*************************988********975 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105331.9E-1680124IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.809.0E-23114167IPR003657WRKY domain
PROSITE profilePS5081121.712121165IPR003657WRKY domain
SuperFamilySSF1182904.18E-18124168IPR003657WRKY domain
SMARTSM007744.6E-18126177IPR003657WRKY domain
PfamPF031068.5E-18128166IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    Send to blast
MMKRGGHGDH QGGSTGAGKG VNLKFDGSNC TGSSSRSFLT SLSMEGSMAS LDGSRSSRPF  60
QLVSGSQTSS TPELGLMQQR RRCAGKEDGS GRCATGSRCH CAKKRKLRIR RSIKVPAISN  120
KVADIPADEF SWRKYGQKPI KGSPHPRGYY KCSSVRGCPA RKHVESVRLG CSYMSGVGVT  180
VTVQGGWRMQ VFFVLKHLMC TPFVVFLHES SVLLGTNSAR KLGIFSPVV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A3e-12119165752WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankDQ8404080.0DQ840408.1 Hordeum vulgare subsp. vulgare WRKY transcription factor 9 (WRKY9) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003559879.13e-89PREDICTED: protein WRKY1-like
SwissprotQ32SG47e-86WRKY1_MAIZE; Protein WRKY1
TrEMBLM8AH171e-167M8AH17_AEGTA; Protein WRKY1
STRINGMLOC_76441.11e-98(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP102503242
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30590.12e-41WRKY DNA-binding protein 21